genewise output
Score 342.09 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00001987_2.0    1 MWAGLTLLLALCLLHGGGAESEGGGPRCQPPPAWKIGEVDPMKESMGRV 
                     MWA L+LLL LCLLHGGGAESEGGGPRCQ  PAWKIGEV+PM ++MG V 
                     MWACLSLLLTLCLLHGGGAESEGGGPRCQLSPAWKIGEVEPMTQAMGHV 
OMLM01003444.1:-8721 atgtcacccactcccgggggaggggcctcctcgtaaggggcaacgagcg 
                     tgcgtgtttctgttagggcagagggcggatcccgatgatactcactgat 
                     gggcccccccccgctgcaagtgatgtctaaaaagaaagggggagagccg 


SPP00001987_2.0   50 TVVALLKASXLYCLVQAS                          LDGLH 
                     TVVAL +A+ L+CL+QAS                          LD L  
                     TVVALFQANCLFCLLQAS           R:R[aga]       LDILR 
OMLM01003444.1:-8574 agggctcgatctttccgtAGGTATGTG  Intron 1   CAGAcgacc 
                     cttcttacagttgttacc  <2-----[8518 : 8255]-2> tattg 
                     gggttcgccctctgggac                          gctgc 


SPP00001987_2.0   74 KKLEGQGLKDVVYMVVNHHEAQAQRLHPLLEERLSQNIALYKQYEHQPD 
                     +KLE QGLKDVVYMVVNH   QAQ LH +L  +LS++I+LYKQ   QPD 
                     QKLERQGLKDVVYMVVNHQGQQAQLLHFMLAAKLSESISLYKQDVEQPD 
OMLM01003444.1:-8238 cacgacgcagggtaggaccgccgcccctacggactgaatctacgggccg 
                     aatagagtaattatttaaagaacattatttccatcagtctaaaataaca 
                     gaggagtggtggcgtgccgggaagcgccggagggagccagtgacgaatc 


SPP00001987_2.0  123 VWRTLNGEKDDFFIYD                          CGRLTHH 
                     VW TL G+KDD++IYD                          CGRLTHH 
                     VWMTLRGQKDDLLIYD           R:R[aga]       CGRLTHH 
OMLM01003444.1:-8091 gtaacagcaggtcatgAGGTTTGTT  Intron 2   CAGAtgccacc 
                     tgtctggaaaatttaa  <2-----[8041 : 7915]-2> gggtcaa 
                     cggagaagatcacttc                          tttcccc 


SPP00001987_2.0  147 LSLPYNIIGHGHVEQAIKEAYCNRVCGECSFE                  
                     +SLPY IIG GHVE AI+EAYCNR+CG+C++E                  
                     ISLPYAIIGQGHVEGAIREAYCNRLCGDCTYE                  
OMLM01003444.1:-7892 atcctgaagcgcggggaaggttacttggtatg                  
                     tctcacttgagatagctgacagagtggagcaa                  
                     tgtgccctaacttgttcagcctctatgccatg                  


SPP00001987_2.0  179                        SADTPAECQGKDNAQPETDGAQPAGE 
                                            S ++P EC+ +  AQP  DG     E 
                                            STESPEECRERTRAQPGADGTPTVEE 
OMLM01003444.1:-7796 GTATAGA  Intron 3   CAGaagacggtagaacgccggggacaggg 
                     <0-----[7796 : 7682]-0>gcagcaaggagcgcacgcagccctaa 
                                            ttgcaggcagactagttatccaaaga 


SPP00001987_2.0  205 E--------HQHQHPHHGHHGHNHGDNHGLHPRGFGHGHDHRH-GHHHR 
                     +        H H HPHH HHGH+HG +HG H  G+ H HDH+H GH H  
                     DTQHGHSQDHHHHHPHH-HHGHHHGLHHG-HGDGLDHNHDHQHDGHGHD 
OMLM01003444.1:-7603 gaccgcacgcccccccc ccgcccgcccg cgggcgcacgcccggcgcg 
                     acaagagaaaaaaacaa aagaaagtaag agagtaaaaaaaaagagaa 
                     ctgttctattttttttt tttcttgtctt tttctttctttattccctc 


SPP00001987_2.0  245 HHHGRAETRL--QEHQHHASSDQMQHAVQLEQIGQEV             
                     H   +++  +  Q H+      Q Q  V L Q+ Q V             
                     HGQSQSQQGVSHQGHEQGVEMSQRQLPVDLGQMQQSV             
OMLM01003444.1:-7462 cgcacaccggaccgcgcgggatcacccggtgcacctg             
                     agagagaagtgaagaaagtatcagatctatgataact             
                     taatatgatttcggtagttggtagaatatacgggaag             


//
Making a R in phase 2 intron
Making a R in phase 2 intron
>OMLM01003444.1:subseq(0,58646).pep
MWACLSLLLTLCLLHGGGAESEGGGPRCQLSPAWKIGEVEPMTQAMGHVTVVALFQANCL
FCLLQASRLDILRQKLERQGLKDVVYMVVNHQGQQAQLLHFMLAAKLSESISLYKQDVEQ
PDVWMTLRGQKDDLLIYDRCGRLTHHISLPYAIIGQGHVEGAIREAYCNRLCGDCTYEST
ESPEECRERTRAQPGADGTPTVEEDTQHGHSQDHHHHHPHHHHGHHHGLHHGHGDGLDHN
HDHQHDGHGHDHGQSQSQQGVSHQGHEQGVEMSQRQLPVDLGQMQQSV
//
>OMLM01003444.1:subseq(0,58646).[8721:7350].sp
ATGTGGGCGTGCCTCAGCCTCCTCCTCACCCTCTGCCTGCTCCATGGGGGCGGAGCAGAG
AGTGAGGGAGGTGGGCCTCGCTGTCAACTATCACCAGCATGGAAAATAGGAGAGGTGGAG
CCGATGACACAGGCAATGGGCCACGTGACGGTGGTGGCTCTTTTCCAGGCCAACTGCCTT
TTCTGTTTGCTGCAGGCATCCAGACTGGACATTCTGCGCCAGAAACTGGAGAGACAGGGT
CTGAAGGATGTGGTGTACATGGTTGTGAACCACCAGGGGCAGCAAGCACAGCTCCTGCAC
TTCATGCTGGCAGCGAAGCTGTCAGAGAGCATCTCACTGTATAAGCAAGACGTGGAACAA
CCTGACGTCTGGATGACACTGAGAGGACAGAAAGATGACTTACTCATTTATGACAGATGT
GGTCGTCTCACCCACCACATTTCGCTTCCGTACGCCATCATTGGACAAGGCCATGTTGAG
GGTGCTATCAGAGAGGCCTACTGTAACCGTTTATGTGGGGACTGCACATATGAGAGTACT
GAGAGCCCAGAGGAGTGCAGAGAGAGAACCCGTGCACAGCCTGGTGCAGATGGCACCCCA
ACAGTAGAGGAAGACACTCAGCATGGTCACAGTCAAGATCATCATCATCATCATCCTCAT
CATCATCATGGTCACCATCATGGGCTTCACCATGGTCATGGTGATGGCCTTGATCATAAC
CATGATCATCAACATGATGGCCACGGCCATGACCATGGACAAAGTCAAAGTCAGCAAGGT
GTTAGTCACCAGGGGCATGAACAGGGTGTTGAGATGTCTCAAAGGCAACTACCTGTAGAT
TTAGGCCAGATGCAGCAATCAGTG
//
OMLM01003444.1:subseq(0,58646)	GeneWise	match	8721	7352	350.07	-	.	OMLM01003444.1:subseq(0,58646)-genewise-prediction-1
OMLM01003444.1:subseq(0,58646)	GeneWise	cds	8721	8519	0.00	-	0	OMLM01003444.1:subseq(0,58646)-genewise-prediction-1
OMLM01003444.1:subseq(0,58646)	GeneWise	intron	8518	8255	0.00	-	.	OMLM01003444.1:subseq(0,58646)-genewise-prediction-1
OMLM01003444.1:subseq(0,58646)	GeneWise	cds	8254	8042	0.00	-	1	OMLM01003444.1:subseq(0,58646)-genewise-prediction-1
OMLM01003444.1:subseq(0,58646)	GeneWise	intron	8041	7915	0.00	-	.	OMLM01003444.1:subseq(0,58646)-genewise-prediction-1
OMLM01003444.1:subseq(0,58646)	GeneWise	cds	7914	7797	0.00	-	1	OMLM01003444.1:subseq(0,58646)-genewise-prediction-1
OMLM01003444.1:subseq(0,58646)	GeneWise	intron	7796	7682	0.00	-	.	OMLM01003444.1:subseq(0,58646)-genewise-prediction-1
OMLM01003444.1:subseq(0,58646)	GeneWise	cds	7681	7352	0.00	-	0	OMLM01003444.1:subseq(0,58646)-genewise-prediction-1
//